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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937939.1_cds_XP_016482990.1_74154
CDS Infomation

[gene=LOC107803740] [db_xref=GeneID:107803740] [protein=protein DETOXIFICATION 44, chloroplastic-like] [protein_id=XP_016482990.1] [location=complement(join(16332..16395,16989..17110,17800..17895,18184..18300,18433..18504,18898..19061,19698..19798,19896..19992,20870..21005,21268..21410,21501..21629,22419..22854))] [gbkey=CDS]
Sequence

ATGGCGTCTGCTCTTTACCACCAAAATAATCCCTTATTTACGCAGTCTCTTCACCAAAAA
AATTATAATTACAGTTATTTCTGTTATTCTACTATTCTTCCGCTAAAGAGTATTAATACT
AACTACTCAACTCGACTGCGTACTACACTAATCAAATCTTCTAGGGACAAAAATCGTATT
GTCCTATCCGAAACTTCTGTCGATAATACCAATTCCAATTCTGATTCGGGAGAAAGTCGG
GTCAAGAGTCCGGATCCTGACCCAGGACCCGATTCGGACCTTCCATCCTCGTCATCGTTG
TTGGATTCAGTCTCTTCCCTGCTGAAATTAGATGGAATTGGATGGGAGATTATGTCCATT
GCGTTGCCCGCGGCGTTAGCTCTTGCTGCTGATCCCATTACTTCACTTGTTGATACTGCA
TTTGTTGGACATTTGGGATCGGTTGAATTGGCAGCAGTAGGTATTTCTGTATCAGTTTTC
AACCTCATATCGAAATTATTCAATGTTCCTTTGCTCAACGTCACAACTTCTTTTGTTGCT
GAAGAGCAGGCATTAATTGCTAAAGGTCGCTCACCTGATTCACAAAGCAAAATACTACTT
CCTTCAGTATCAACTTCTTTGCTACTTGCTCTTGGCCTTGGCATTGCAGAAGCTGTTGGA
CTTTCTTTTGGCTCCGGTTTCCTGATGAATACCATGGGTATATCTGTTGATTCACCAATG
CGTGTACCAGCTGAGCAATTCCTTACAATGCGGGCCTTTGGAGCTCCACCAATCGTAATA
GCACTTGCTGCTCAAGGAACATTTCGTGGATTTAAGGACACAAAAACTCCTTTATATGCT
GTTGGAGCTGGTAACTTGCTAAATGCATTATTGTCTCCAATTTTGATATTTCCCTTTGGT
TTTGGTATTAGTGGGGCTGCAACTGCTGCTGTGATATCTGAATACTTGTCTGCTTTTATC
CTTATGTGGAAGTTAAACGAAAAAGTACTTCTTATTGCTCCAGACGTTGACGTGGGAAGA
TTTGCTCAGTATCTTAAATCTGGTTCCCTTCTAATAGGGAGGACTTTAGCACTTCTAATT
ACCACTACGCTATCAACAGCAATGGCAGCACAAGAGGGCCCCGTTCCTATGGCTGGTCAT
CAGATCTGTGTTCAAGTTTGGCTAGCTGTATCATTGCTAACTGATGCCTTGGCACTTGCT
GGACAGGCTCTCCTTGCCAGTGGAGTTTCTCAAGGTAATTATGGCCAAGCACGAGAAGTG
GTTTATAAAGTTCTACAGATTGGTGCATTGACAGGAGTCACCTTGGGTTTTAGCTTGTTT
GTTGGTTTTGAAGCGCTCTCCGGCTTATTCAGCTCAGATTCTGAAGTCCTGGAAATTGCC
AGATATGGTACTCTGTTTGTTGCTGGATCTCAGCCAATAAATGCCATTGCCTTCGTTCTT
GATGGGCTCTATTATGGTGTTTCAGACTTCGAATTTGCTGCATATTCTATGTTTCTGATT
GGACTAGTCTCCTCAATCTTCTTACTTGTGGCTGCACCATCATTTGGTCTTCCTGGAGTC
TGGGCGGGACTTTTTCTCTTCATGACTTTGCGTGTTGTAGCTGGATTTTTGAGGTTACAA
ACAAGAGATGGACCATGGAAATTTCTTCGGTCGGATATGGAAGAGGATGGTGTCTGA

Peptide Sequence

PEP ID

XP_016482990.1
PEP Infomation

PREDICTED: protein DETOXIFICATION 44, chloroplastic-like [Nicotiana tabacum]
Sequence

MASALYHQNNPLFTQSLHQKNYNYSYFCYSTILPLKSINTNYSTRLRTTLIKSSRDKNRI
VLSETSVDNTNSNSDSGESRVKSPDPDPGPDSDLPSSSSLLDSVSSLLKLDGIGWEIMSI
ALPAALALAADPITSLVDTAFVGHLGSVELAAVGISVSVFNLISKLFNVPLLNVTTSFVA
EEQALIAKGRSPDSQSKILLPSVSTSLLLALGLGIAEAVGLSFGSGFLMNTMGISVDSPM
RVPAEQFLTMRAFGAPPIVIALAAQGTFRGFKDTKTPLYAVGAGNLLNALLSPILIFPFG
FGISGAATAAVISEYLSAFILMWKLNEKVLLIAPDVDVGRFAQYLKSGSLLIGRTLALLI
TTTLSTAMAAQEGPVPMAGHQICVQVWLAVSLLTDALALAGQALLASGVSQGNYGQAREV
VYKVLQIGALTGVTLGFSLFVGFEALSGLFSSDSEVLEIARYGTLFVAGSQPINAIAFVL
DGLYYGVSDFEFAAYSMFLIGLVSSIFLLVAAPSFGLPGVWAGLFLFMTLRVVAGFLRLQ
TRDGPWKFLRSDMEEDGV

Transcript Sequence

Gene sequence data has not been registered.